handle empty points in the image

Sonja Stockhaus · Sonja Stockhaus · commit 43b6b3e5aefa · 2023-08-03T10:09:47.000+02:00
diff --git a/src/spatialdata_plot/pl/utils.py b/src/spatialdata_plot/pl/utils.py
@@ -314,11 +314,13 @@ def get_point_bb(
 
                         # Split by Point and Polygon:
                         tmp_points = sdata.shapes[e_id][
-                            sdata.shapes[e_id]["geometry"].apply(lambda geom: geom.geom_type == "Point")
+                            sdata.shapes[e_id]["geometry"].apply(
+                                lambda geom: (geom.geom_type == "Point" and not geom.is_empty)
+                            )
                         ]
                         tmp_polygons = sdata.shapes[e_id][
                             sdata.shapes[e_id]["geometry"].apply(
-                                lambda geom: geom.geom_type in ["Polygon", "MultiPolygon"]
+                                lambda geom: (geom.geom_type in ["Polygon", "MultiPolygon"] and not geom.is_empty)
                             )
                         ]
 

Original file line number	Diff line number	Diff line change
`@@ -314,11 +314,13 @@ def get_point_bb(`
`314`	`314`
`315`	`315`	`# Split by Point and Polygon:`
`316`	`316`	`tmp_points = sdata.shapes[e_id][`
`317`		`- sdata.shapes[e_id]["geometry"].apply(lambda geom: geom.geom_type == "Point")`
	`317`	`+ sdata.shapes[e_id]["geometry"].apply(`
	`318`	`+ lambda geom: (geom.geom_type == "Point" and not geom.is_empty)`
	`319`	`+ )`
`318`	`320`	`]`
`319`	`321`	`tmp_polygons = sdata.shapes[e_id][`
`320`	`322`	`sdata.shapes[e_id]["geometry"].apply(`
`321`		`- lambda geom: geom.geom_type in ["Polygon", "MultiPolygon"]`
	`323`	`+ lambda geom: (geom.geom_type in ["Polygon", "MultiPolygon"] and not geom.is_empty)`
`322`	`324`	`)`
`323`	`325`	`]`
`324`	`326`